Stem-loop pal-mir-216b

Accession

MI0032468

Description

Pteropus alecto pal-mir-216b precursor miRNA

Sequence

AAAUCUCUGCAGGCAAAUGUGAugucacuaaagaaaucaCACACUUACCUGUAGAGAUUCU
.((((((((((((.((.((((((.((......)).))))))...)).))))))))))))..

Structure

-A            C  --A      g  ac 
  AAUCUCUGCAGG AA   UGUGAu uc  u
  |||||||||||| ||   |||||| ||   
  UUAGAGAUGUCC UU   ACacua ag  a
UC            A  CAC      a  aa 

Annotation confidence Not enough data

Genome context

KB030567.1: 12667368-12667428 [+]

Mature pal-miR-216b-5p

• Accession: MIMAT0040051
• Description: Pteropus alecto pal-miR-216b-5p mature miRNA
• Sequence: 1 - AAAUCUCUGCAGGCAAAUGUGA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-216b-3p

• Accession: MIMAT0040052
• Description: Pteropus alecto pal-miR-216b-3p mature miRNA
• Sequence: 40 - CACACUUACCUGUAGAGAUUCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682