Stem-loop pal-mir-454

Accession

MI0032470

Description

Pteropus alecto pal-mir-454 precursor miRNA

Sequence

ACCCUAUCGAUAUUGUCUGCUGUguaaauagcucugagUAGUGCAAUAUUGCUUAUAGGGUUU
(((((((((((((((((((((..((.....))....))))).)))))))))...)))))))..

Structure

--       ---         -     --GU  a 
  ACCCUAU   CGAUAUUGU CUGCU    gu a
  |||||||   ||||||||| |||||    || a
  UGGGAUA   GUUAUAACG GAUga    cg u
UU       UUC         U     gucu  a 

Annotation confidence Not enough data

Genome context

KB031150.1: 11786590-11786652 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-454

Mature pal-miR-454-5p

• Accession: MIMAT0040055
• Description: Pteropus alecto pal-miR-454-5p mature miRNA
• Sequence: 1 - ACCCUAUCGAUAUUGUCUGCUGU - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-454-3p

• Accession: MIMAT0040056
• Description: Pteropus alecto pal-miR-454-3p mature miRNA
• Sequence: 39 - UAGUGCAAUAUUGCUUAUAGGGUUU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682