Stem-loop pal-mir-9989

Accession

MI0032471

Description

Pteropus alecto pal-mir-9989 precursor miRNA

Sequence

CAUCCCCAGUUGUCAGCCAGUGCguuggagcACUGGAGGCAGGUGGGGGUGC
((((((((.(((((..(((((((......))))))).))))).)))))))).

Structure

-        G     AG       gu 
 CAUCCCCA UUGUC  CCAGUGC  u
 |||||||| |||||  |||||||   
 GUGGGGGU GACGG  GGUCAcg  g
C        G     -A       ag 

Annotation confidence Not enough data

Genome context

KB030625.1: 435293-435344 [+]

Mature pal-miR-9989-5p

• Accession: MIMAT0040057
• Description: Pteropus alecto pal-miR-9989-5p mature miRNA
• Sequence: 1 - CAUCCCCAGUUGUCAGCCAGUGC - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-9989-3p

• Accession: MIMAT0040058
• Description: Pteropus alecto pal-miR-9989-3p mature miRNA
• Sequence: 32 - ACUGGAGGCAGGUGGGGGUGC - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682