Stem-loop pal-mir-8908e

Accession

MI0032474

Description

Pteropus alecto pal-mir-8908e precursor miRNA

Sequence

UUAUUCAGAAAGGAGCAGAUUgcuuauacugcauguAAUUUGCACCGUUCUGAGUAGA
((((((((((.((.(((((((((...........))))))))).)).)))))))))).

Structure

-          A  A         uuau 
 UUAUUCAGAA GG GCAGAUUgc    a
 |||||||||| || |||||||||    c
 GAUGAGUCUU CC CGUUUAAug    u
A          G  A         uacg 

Annotation confidence Not enough data

Genome context

KB030657.1: 3681-3738 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-8908e

Mature pal-miR-8908e-5p

• Accession: MIMAT0040063
• Description: Pteropus alecto pal-miR-8908e-5p mature miRNA
• Sequence: 1 - UUAUUCAGAAAGGAGCAGAUU - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-8908e-3p

• Accession: MIMAT0040064
• Description: Pteropus alecto pal-miR-8908e-3p mature miRNA
• Sequence: 37 - AAUUUGCACCGUUCUGAGUAGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682