Stem-loop pal-mir-497

Accession

MI0032482

Description

Pteropus alecto pal-mir-497 precursor miRNA

Sequence

CAGCAGCACACUGUGGUUUGUacggcacuguggccacguccAAACCACACUGUGGUGUUAGAGCGAG
.((((.((((.(((((((((.(((((......)))..)).))))))))).)))).))))........

Structure

-------C    G    C         U  --   ac 
        AGCA CACA UGUGGUUUG ac  ggc  u
        |||| |||| ||||||||| ||  |||   
        UUGU GUGU ACACCAAAc ug  ccg  g
GAGCGAGA    G    C         c  ca   gu 

Annotation confidence Not enough data

Genome context

KB031076.1: 3032509-3032575 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-497

Mature pal-miR-497-5p

• Accession: MIMAT0040077
• Description: Pteropus alecto pal-miR-497-5p mature miRNA
• Sequence: 1 - CAGCAGCACACUGUGGUUUGU - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-497-3p

• Accession: MIMAT0040078
• Description: Pteropus alecto pal-miR-497-3p mature miRNA
• Sequence: 42 - AAACCACACUGUGGUGUUAGAGCGAG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682