Stem-loop pal-mir-195

Accession

MI0032485

Description

Pteropus alecto pal-mir-195 precursor miRNA

Sequence

UAGCAGCACAGAAAUAUUGGCAcugggaagagagucugCCAAUAUUGGCUGAGCUGCUCCA
.((((((.(((.((((((((((((........)))..)))))))))..))).))))))...

Structure

--U      A   -A         --   ggg 
   AGCAGC CAG  AAUAUUGGC  Acu   a
   |||||| |||  |||||||||  |||    
   UCGUCG GUC  UUAUAACCg  uga   a
ACC      A   GG         uc   gag 

Annotation confidence Not enough data

Genome context

KB031076.1: 3032192-3032252 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-195

Mature pal-miR-195-5p

• Accession: MIMAT0040083
• Description: Pteropus alecto pal-miR-195-5p mature miRNA
• Sequence: 1 - UAGCAGCACAGAAAUAUUGGCA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-195-3p

• Accession: MIMAT0040084
• Description: Pteropus alecto pal-miR-195-3p mature miRNA
• Sequence: 39 - CCAAUAUUGGCUGAGCUGCUCCA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682