Stem-loop pal-mir-133b

Accession

MI0032488

Description

Pteropus alecto pal-mir-133b precursor miRNA

Sequence

CUGGUCAAACGGAACCAAGUccgucuuccugagagguUUGGUCCCCUUCAACCAGCU
(((((..((.((.((((((.((.((((...)))))))))))).)).))..)))))..

Structure

--     CA  C  A      U  g    c 
  CUGGU  AA GG ACCAAG cc ucuu  
  |||||  || || |||||| || |||| c
  GACCA  UU CC UGGUUu gg agag  
UC     AC  C  C      -  -    u 

Annotation confidence Not enough data

Genome context

KB031158.1: 33908793-33908849 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-133b

Mature pal-miR-133b-5p

• Accession: MIMAT0040089
• Description: Pteropus alecto pal-miR-133b-5p mature miRNA
• Sequence: 1 - CUGGUCAAACGGAACCAAGU - 20
• Evidence: experimental ; Illumina [1]

Mature pal-miR-133b-3p

• Accession: MIMAT0040090
• Description: Pteropus alecto pal-miR-133b-3p mature miRNA
• Sequence: 38 - UUGGUCCCCUUCAACCAGCU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682