Stem-loop pal-mir-330

Accession

MI0032491

Description

Pteropus alecto pal-mir-330 precursor miRNA

Sequence

UCUCUGGGCCUGUGUCUUAGGCUcugcaagaugaaccgaGCAAAGCACACGGCCUGCAGAGA
((((((((((((((.(((..((((.............)))).))))))).))))..))))))

Structure

      --    -    U   AG    ugcaa 
UCUCUG  GGCC UGUG CUU  GCUc     g
||||||  |||| |||| |||  ||||     a
AGAGAC  CCGG ACAC GAA  CGag     u
      GU    C    -   -A    ccaag 

Annotation confidence Not enough data

Genome context

KB030659.1: 1498137-1498198 [-]

Mature pal-miR-330-5p

• Accession: MIMAT0040095
• Description: Pteropus alecto pal-miR-330-5p mature miRNA
• Sequence: 1 - UCUCUGGGCCUGUGUCUUAGGCU - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-330-3p

• Accession: MIMAT0040096
• Description: Pteropus alecto pal-miR-330-3p mature miRNA
• Sequence: 40 - GCAAAGCACACGGCCUGCAGAGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682