Stem-loop pal-mir-429

Accession

MI0032493

Description

Pteropus alecto pal-mir-429 precursor miRNA

Sequence

GUCUUACCAGACACGGUUAGAccuggguccuucugucUAAUACUGUCUGGUAAUGCCGU
((.((((((((((..(((((((..(((....))))))))))..)))))))))).))...

Structure

---  C          CG       cu   u 
   GU UUACCAGACA  GUUAGAc  ggg c
   || ||||||||||  |||||||  |||  
   CG AAUGGUCUGU  UAAUcug  ucu c
UGC  U          CA       --   u 

Annotation confidence Not enough data

Genome context

KB030251.1: 245888-245946 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pal-mir-429

Mature pal-miR-429-5p

• Accession: MIMAT0040099
• Description: Pteropus alecto pal-miR-429-5p mature miRNA
• Sequence: 1 - GUCUUACCAGACACGGUUAGA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-429-3p

• Accession: MIMAT0040100
• Description: Pteropus alecto pal-miR-429-3p mature miRNA
• Sequence: 38 - UAAUACUGUCUGGUAAUGCCGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682