Stem-loop pal-mir-196a

Accession

MI0032496

Description

Pteropus alecto pal-mir-196a precursor miRNA

Sequence

UAGGUAGUUUCAUGUUGUUGGGAuugaguuuugaacUCGGCAACAAGAAACUGCCUGAG
(((((((((((.((((((((((.((........)))))))))))).)))))))))))..

Structure

--           A          A  gag 
  UAGGUAGUUUC UGUUGUUGGG uu   u
  ||||||||||| |||||||||| ||    
  GUCCGUCAAAG ACAACGGCUc aa   u
GA           A          -  guu 

Annotation confidence Not enough data

Genome context

KB030275.1: 798972-799030 [-]

Mature pal-miR-196a-5p

• Accession: MIMAT0040104
• Description: Pteropus alecto pal-miR-196a-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCAUGUUGUUGGGA - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-196a-3p

• Accession: MIMAT0040105
• Description: Pteropus alecto pal-miR-196a-3p mature miRNA
• Sequence: 37 - UCGGCAACAAGAAACUGCCUGAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682