Stem-loop pal-mir-222

Accession

MI0032506

Description

Pteropus alecto pal-mir-222 precursor miRNA

Sequence

GCUCAGUAGCCAGUGUAGAUCCugucuuuuguaaucaguAGCUACAUCUGGCUACUGGGUCU
((((((((((((((((((...(((...........)))...))))).)))))))))))))..

Structure

--             -     AUC   ucuu 
  GCUCAGUAGCCAG UGUAG   Cug    u
  ||||||||||||| |||||   |||    u
  UGGGUCAUCGGUC ACAUC   gac    g
UC             U     GAu   uaau 

Annotation confidence Not enough data

Genome context

KB030414.1: 105975-106036 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-222

Mature pal-miR-222-5p

• Accession: MIMAT0040124
• Description: Pteropus alecto pal-miR-222-5p mature miRNA
• Sequence: 1 - GCUCAGUAGCCAGUGUAGAUCC - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-222-3p

• Accession: MIMAT0040125
• Description: Pteropus alecto pal-miR-222-3p mature miRNA
• Sequence: 40 - AGCUACAUCUGGCUACUGGGUCU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682