Stem-loop pal-mir-1224

Accession

MI0032510

Description

Pteropus alecto pal-mir-1224 precursor miRNA

Sequence

GUGAGGACUCGGGAGGUGGAGggugguguugccaggccguugucucagcucacuucuccccCCACCUCCUCUCUCCUCAGGU
.((((((...(((((((((.(((.((((..((.((((....))))..)).))))...))).)))))))))...))))))...

Structure

--G      CUC         A   --u    uu  -c    c 
   UGAGGA   GGGAGGUGG Ggg   ggug  gc  aggc g
   ||||||   ||||||||| |||   ||||  ||  ||||  
   ACUCCU   UCCUCCACC ccc   ucac  cg  ucug u
UGG      CUC         c   ucu    -u  ac    u 

Annotation confidence Not enough data

Genome context

KB031155.1: 2851154-2851235 [+]

Mature pal-miR-1224-5p

• Accession: MIMAT0040132
• Description: Pteropus alecto pal-miR-1224-5p mature miRNA
• Sequence: 1 - GUGAGGACUCGGGAGGUGGAG - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-1224-3p

• Accession: MIMAT0040133
• Description: Pteropus alecto pal-miR-1224-3p mature miRNA
• Sequence: 62 - CCACCUCCUCUCUCCUCAGGU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682