Stem-loop pal-mir-20a

Accession

MI0032513

Description

Pteropus alecto pal-mir-20a precursor miRNA

Sequence

UAAAGUGCUUAUAGUGCAGGUAGuguuuaguuaucuACUGCAUUAUGAGCACUUAAAGU
..(((((((((((((((((.(((...........)))))))))))))))))))).....

Structure

---UA                 G   uguu 
     AAGUGCUUAUAGUGCAG UAG    u
     ||||||||||||||||| |||    a
     UUCACGAGUAUUACGUC Auc    g
UGAAA                 -   uauu 

Annotation confidence Not enough data

Genome context

KB030714.1: 19601717-19601775 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from pal-mir-20a

Mature pal-miR-20a-5p

• Accession: MIMAT0040138
• Description: Pteropus alecto pal-miR-20a-5p mature miRNA
• Sequence: 1 - UAAAGUGCUUAUAGUGCAGGUAG - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-20a-3p

• Accession: MIMAT0040139
• Description: Pteropus alecto pal-miR-20a-3p mature miRNA
• Sequence: 37 - ACUGCAUUAUGAGCACUUAAAGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682