Stem-loop pal-mir-183

Accession

MI0032516

Description

Pteropus alecto pal-mir-183 precursor miRNA

Sequence

UAUGGCACUGGUAGAAUUCACUgugaacagucucggucagUGAAUUACCGAAGGGCCAUAAA
((((((.((((((..(((((((((((......)))..))))))))))))..)).))))))..

Structure

--      A  --    GA        --   ac 
  UAUGGC CU  GGUA  AUUCACUg  uga  a
  |||||| ||  ||||  ||||||||  |||   
  AUACCG GA  CCAU  UAAGUgac  gcu  g
AA      G  AG    --        ug   cu 

Annotation confidence Not enough data

Genome context

KB030581.1: 9530388-9530449 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pal-mir-183

Mature pal-miR-183-5p

• Accession: MIMAT0040144
• Description: Pteropus alecto pal-miR-183-5p mature miRNA
• Sequence: 1 - UAUGGCACUGGUAGAAUUCACU - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-183-3p

• Accession: MIMAT0040145
• Description: Pteropus alecto pal-miR-183-3p mature miRNA
• Sequence: 41 - UGAAUUACCGAAGGGCCAUAAA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682