Stem-loop pal-mir-127

Accession

MI0032517

Description

Pteropus alecto pal-mir-127 precursor miRNA

Sequence

CUGAAGCUCAGAGGGCUCUGAuucagaaagaucaUCGGAUCCGUCUGAGCUUGGCU
.(.(((((((((.((.((((((((.....))..)))))).)).))))))))).)..

Structure

-C G         G  C      --  a 
  U AAGCUCAGA GG UCUGAu  uc g
  | ||||||||| || ||||||  || a
  G UUCGAGUCU CC AGGCUa  ag a
UC G         G  U      cu  a 

Annotation confidence Not enough data

Genome context

KB031153.1: 21955620-21955675 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from pal-mir-127

Mature pal-miR-127-5p

• Accession: MIMAT0040146
• Description: Pteropus alecto pal-miR-127-5p mature miRNA
• Sequence: 1 - CUGAAGCUCAGAGGGCUCUGA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-127-3p

• Accession: MIMAT0040147
• Description: Pteropus alecto pal-miR-127-3p mature miRNA
• Sequence: 35 - UCGGAUCCGUCUGAGCUUGGCU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682