Stem-loop pal-mir-410

Accession

MI0032520

Description

Pteropus alecto pal-mir-410 precursor miRNA

Sequence

AGGUUGUCUGUGAUGAGUUCGcuuuauuaaugacgAAUAUAACACAGAUGGCCUGU
((((((((((((.((.((((((.........).))))).)).))))))))))))..

Structure

--            A  A     - uuu 
  AGGUUGUCUGUG UG GUUCG c   a
  |||||||||||| || ||||| |   u
  UCCGGUAGACAC AU UAAgc g   u
UG            A  A     a uaa 

Annotation confidence Not enough data

Genome context

KB031153.1: 22108342-22108397 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from pal-mir-410

Mature pal-miR-410-5p

• Accession: MIMAT0040151
• Description: Pteropus alecto pal-miR-410-5p mature miRNA
• Sequence: 1 - AGGUUGUCUGUGAUGAGUUCG - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-410-3p

• Accession: MIMAT0040152
• Description: Pteropus alecto pal-miR-410-3p mature miRNA
• Sequence: 36 - AAUAUAACACAGAUGGCCUGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682