Stem-loop pal-mir-381

Accession

MI0032522

Description

Pteropus alecto pal-mir-381 precursor miRNA

Sequence

CGAGGUUGCCCUUUGUAUAUUCgguuuauuaacauagaAUAUACAAGGGCAAGCUCUCU
.(((.((((((((.((((((((.(((....)))...)))))))))))))))).)))...

Structure

--C   G        U        --g   u 
   GAG UUGCCCUU GUAUAUUC   guu a
   ||| |||||||| ||||||||   |||  
   CUC AACGGGAA CAUAUAag   caa u
UCU   G        -        aua   u 

Annotation confidence Not enough data

Genome context

KB031153.1: 22088438-22088496 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from pal-mir-381

Mature pal-miR-381-5p

• Accession: MIMAT0040154
• Description: Pteropus alecto pal-miR-381-5p mature miRNA
• Sequence: 1 - CGAGGUUGCCCUUUGUAUAUUC - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-381-3p

• Accession: MIMAT0040155
• Description: Pteropus alecto pal-miR-381-3p mature miRNA
• Sequence: 39 - AUAUACAAGGGCAAGCUCUCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682