Stem-loop pal-mir-145

Accession

MI0032524

Description

Pteropus alecto pal-mir-145 precursor miRNA

Sequence

GUCCAGUUUUCCCAGGAAUCCCUuagaugcuaagauggggAUUCCUGGAAAUACUGUUCUU
...((((.((.((((((((((((.............)))))))))))).)).)))).....

Structure

--GUC    U  C            uagau 
     CAGU UU CCAGGAAUCCCU     g
     |||| || ||||||||||||     c
     GUCA AA GGUCCUUAgggg     u
UUCUU    U  A            uagaa 

Annotation confidence Not enough data

Genome context

KB030406.1: 1369495-1369555 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-145

Mature pal-miR-145-5p

• Accession: MIMAT0040158
• Description: Pteropus alecto pal-miR-145-5p mature miRNA
• Sequence: 1 - GUCCAGUUUUCCCAGGAAUCCCU - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-145-3p

• Accession: MIMAT0040159
• Description: Pteropus alecto pal-miR-145-3p mature miRNA
• Sequence: 41 - AUUCCUGGAAAUACUGUUCUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682