Stem-loop pal-mir-452

Accession

MI0032531

Description

Pteropus alecto pal-mir-452 precursor miRNA

Sequence

AACUGUUUGCAGAGGAAACUGAgacuuuauaacuacaucUCAGUCUCAUCUGCAAAGAAGU
.(((.((((((((.((.(((((((.............))))))).)).))))))))..)))

Structure

A   -G        G  A       cuuua 
 ACU  UUUGCAGA GA ACUGAga     u
 |||  |||||||| || |||||||     a
 UGA  AAACGUCU CU UGACUcu     a
-   AG        A  C       acauc 

Annotation confidence Not enough data

Genome context

KB030305.1: 9522-9582 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-452

Mature pal-miR-452-5p

• Accession: MIMAT0040169
• Description: Pteropus alecto pal-miR-452-5p mature miRNA
• Sequence: 1 - AACUGUUUGCAGAGGAAACUGA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-452-3p

• Accession: MIMAT0040170
• Description: Pteropus alecto pal-miR-452-3p mature miRNA
• Sequence: 40 - UCAGUCUCAUCUGCAAAGAAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682