Stem-loop pal-mir-29b-1

Accession

MI0032534

Description

Pteropus alecto pal-mir-29b-1 precursor miRNA

Sequence

AGCUGGUUUCAUAUGGUGGUUUAGAuuuaaauagugauugucUAGCACCAUUUGAAAUCAGUGUU
.((((((((((.((((((..((((((.............)))))))))))).))))))))))...

Structure

--A          U      GU      uuaaa 
   GCUGGUUUCA AUGGUG  UUAGAu     u
   |||||||||| ||||||  ||||||     a
   UGACUAAAGU UACCAC  GAUcug     g
UUG          U      --      uuagu 

Annotation confidence Not enough data

Genome context

KB030581.1: 8753632-8753696 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-29b-1

Mature pal-miR-29b-5p

• Accession: MIMAT0040175
• Description: Pteropus alecto pal-miR-29b-5p mature miRNA
• Sequence: 1 - AGCUGGUUUCAUAUGGUGGUUUAGA - 25
• Evidence: experimental ; Illumina [1]

Mature pal-miR-29b-3p

• Accession: MIMAT0040176
• Description: Pteropus alecto pal-miR-29b-3p mature miRNA
• Sequence: 43 - UAGCACCAUUUGAAAUCAGUGUU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682