Stem-loop pal-mir-29c

Accession

MI0032545

Description

Pteropus alecto pal-mir-29c precursor miRNA

Sequence

UGACCGAUUUCUCCUGGUGUUCagagucuguuuuugucUAGCACCAUUUGAAAUCGGUUA
(((((((((((...(((((((.(((...........))))))))))...)))))))))))

Structure

           UCC       C   gucu 
UGACCGAUUUC   UGGUGUU aga    g
|||||||||||   ||||||| |||    u
AUUGGCUAAAG   ACCACGA Ucu    u
           UUU       -   guuu 

Annotation confidence Not enough data

Genome context

KB030474.1: 126678-126737 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-29c

Mature pal-miR-29c-5p

• Accession: MIMAT0040197
• Description: Pteropus alecto pal-miR-29c-5p mature miRNA
• Sequence: 1 - UGACCGAUUUCUCCUGGUGUUC - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-29c-3p

• Accession: MIMAT0040198
• Description: Pteropus alecto pal-miR-29c-3p mature miRNA
• Sequence: 39 - UAGCACCAUUUGAAAUCGGUUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682