Stem-loop pal-mir-106a

Accession

MI0032549

Description

Pteropus alecto pal-mir-106a precursor miRNA

Sequence

AAAAGUGCUUACAGUGCAGGUAGcuuuuugagaucuACUGCAAUGCAAGCACUUCUUAC
..((((((((.((.(((((.(((.(((...))).)))))))).)).)))))))).....

Structure

---AA        A  G     G   c   u 
     AAGUGCUU CA UGCAG UAG uuu  
     |||||||| || ||||| ||| ||| u
     UUCACGAA GU ACGUC Auc aga  
CAUUC        C  A     -   u   g 

Annotation confidence Not enough data

Genome context

KB031071.1: 682421-682479 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from pal-mir-106a

Mature pal-miR-106a-5p

• Accession: MIMAT0040204
• Description: Pteropus alecto pal-miR-106a-5p mature miRNA
• Sequence: 1 - AAAAGUGCUUACAGUGCAGGUAG - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-106a-3p

• Accession: MIMAT0040205
• Description: Pteropus alecto pal-miR-106a-3p mature miRNA
• Sequence: 37 - ACUGCAAUGCAAGCACUUCUUAC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682