Stem-loop pal-mir-376d

Accession

MI0032551

Description

Pteropus alecto pal-mir-376d precursor miRNA

Literature search

1 open access papers mention pal-mir-376d
(1 sentences)

Sequence

GUAGAUUUUCCUUCUAUGAUUAcgugguugaugguugAUCGUAGAGGAAAAUCCACGU
((.(((((((((.((((((((((((.....)))..)))))))))))))))))).))..

Structure

--  A         U         --   g 
  GU GAUUUUCCU CUAUGAUUA  cgu g
  || ||||||||| |||||||||  ||| u
  CA CUAAAAGGA GAUGCUAgu  gua u
UG  C         -         ug   g 

Annotation confidence Not enough data

Genome context

KB031153.1: 22084388-22084445 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from pal-mir-376d

Mature pal-miR-376d-5p

• Accession: MIMAT0040208
• Description: Pteropus alecto pal-miR-376d-5p mature miRNA
• Sequence: 1 - GUAGAUUUUCCUUCUAUGAUUA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-376d-3p

• Accession: MIMAT0040209
• Description: Pteropus alecto pal-miR-376d-3p mature miRNA
• Sequence: 38 - AUCGUAGAGGAAAAUCCACGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682