Stem-loop pal-mir-544

Accession

MI0032553

Description

Pteropus alecto pal-mir-544 precursor miRNA

Sequence

UCUUGUUAAAAGGCAGAUUCUgauucagggaccaagAUUCUGCAUUUUUAGCAAGUU
.((((((((((((((((.(((.............))).))))).)))))))))))..

Structure

-U           -     U   gauuc 
  CUUGUUAAAAG GCAGA UCU     a
  ||||||||||| ||||| |||     g
  GAACGAUUUUU CGUCU Aga     g
UU           A     U   accag 

Annotation confidence Not enough data

Genome context

KB031153.1: 22091066-22091122 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from pal-mir-544

Mature pal-miR-544-5p

• Accession: MIMAT0040211
• Description: Pteropus alecto pal-miR-544-5p mature miRNA
• Sequence: 1 - UCUUGUUAAAAGGCAGAUUCU - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-544-3p

• Accession: MIMAT0040212
• Description: Pteropus alecto pal-miR-544-3p mature miRNA
• Sequence: 37 - AUUCUGCAUUUUUAGCAAGUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682