Stem-loop pal-mir-9996

Accession

MI0032558

Description

Pteropus alecto pal-mir-9996 precursor miRNA

Sequence

UUUACCAUCAUUCUGCCCUGUCucuccaacuAGGGGCAGCAUGGUGUAGCAG
.....((((((.(((((((.............))))))).))))))......

Structure

-UUUAC      U       GUCuc 
      CAUCAU CUGCCCU     u
      |||||| |||||||     c
      GUGGUA GACGGGG     c
GACGAU      C       Aucaa 

Annotation confidence Not enough data

Genome context

KB031148.1: 5077175-5077226 [+]

Mature pal-miR-9996-5p

• Accession: MIMAT0040220
• Description: Pteropus alecto pal-miR-9996-5p mature miRNA
• Sequence: 1 - UUUACCAUCAUUCUGCCCUGUC - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-9996-3p

• Accession: MIMAT0040221
• Description: Pteropus alecto pal-miR-9996-3p mature miRNA
• Sequence: 32 - AGGGGCAGCAUGGUGUAGCAG - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682