Stem-loop pal-mir-8908g

Accession

MI0032562

Description

Pteropus alecto pal-mir-8908g precursor miRNA

Sequence

UACUCAGAAGGGGCCAGGUUGcuuagacugcacgUGACCUGCGCCAUUCUGAGUAU
(((((((((..(((((((((((...........)))))))).))).))))))))).

Structure

-         GG   -        uuag 
 UACUCAGAA  GGC CAGGUUGc    a
 |||||||||  ||| ||||||||    c
 AUGAGUCUU  CCG GUCCAGUg    u
U         -A   C        cacg 

Annotation confidence Not enough data

Genome context

KB030657.1: 1563-1618 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-8908g

Mature pal-miR-8908g-5p

• Accession: MIMAT0040228
• Description: Pteropus alecto pal-miR-8908g-5p mature miRNA
• Sequence: 1 - UACUCAGAAGGGGCCAGGUUG - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-8908g-3p

• Accession: MIMAT0040229
• Description: Pteropus alecto pal-miR-8908g-3p mature miRNA
• Sequence: 35 - UGACCUGCGCCAUUCUGAGUAU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682