Stem-loop pal-mir-8908f

Accession

MI0032567

Description

Pteropus alecto pal-mir-8908f precursor miRNA

Sequence

UAUUUAGGAAGGCACUAUUCAUaauuauuauauuaUGAAGUGCAUCUUCCUGAAUAGA
((((((((((((((((..(((((((......))))))))))))..)))))))))))..

Structure

--           --     AU       ua 
  UAUUUAGGAAG  GCACU  UCAUaau  u
  |||||||||||  |||||  |||||||   
  AUAAGUCCUUC  CGUGA  AGUauua  u
AG           UA     --       ua 

Annotation confidence Not enough data

Genome context

KB030676.1: 1608463-1608520 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pal-mir-8908f

Mature pal-miR-8908f-5p

• Accession: MIMAT0040238
• Description: Pteropus alecto pal-miR-8908f-5p mature miRNA
• Sequence: 1 - UAUUUAGGAAGGCACUAUUCAU - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-8908f-3p

• Accession: MIMAT0040239
• Description: Pteropus alecto pal-miR-8908f-3p mature miRNA
• Sequence: 36 - UGAAGUGCAUCUUCCUGAAUAGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682