Stem-loop pal-mir-6119

Accession

MI0032568

Description

Pteropus alecto pal-mir-6119 precursor miRNA

Sequence

AGAGGUAAAAAUUUGAUUUGAcuaguuaaauacaucuagcAAAUCAUUUUUUACUCCCCA
...((((((((..(((((((.((((..........))))))))))).)))))))).....

Structure

--AGA        UU       A    uuaa 
     GGUAAAAA  UGAUUUG cuag    a
     ||||||||  ||||||| ||||     
     UCAUUUUU  ACUAAAc gauc    u
ACCCC        -U       -    uaca 

Annotation confidence Not enough data

Genome context

KB030280.1: 218728-218787 [+]

Mature pal-miR-6119-5p

• Accession: MIMAT0040240
• Description: Pteropus alecto pal-miR-6119-5p mature miRNA
• Sequence: 1 - AGAGGUAAAAAUUUGAUUUGA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-6119-3p

• Accession: MIMAT0040241
• Description: Pteropus alecto pal-miR-6119-3p mature miRNA
• Sequence: 41 - AAAUCAUUUUUUACUCCCCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682