Stem-loop pal-mir-628

Accession

MI0032569

Description

Pteropus alecto pal-mir-628 precursor miRNA

Sequence

AUGCUGACAUAUUUACUAGAGGguaaaguuaauaaccuUCUAGUAAGAGUGGCAGUUGAA
..((((.(((.(((((((((((((..........))))))))))))).))).))))....

Structure

--AU    A   A             aaag 
    GCUG CAU UUUACUAGAGGgu    u
    |||| ||| |||||||||||||     
    UGAC GUG GAAUGAUCUucca    u
AAGU    G   A             auaa 

Annotation confidence Not enough data

Genome context

KB031042.1: 17725315-17725374 [+]

Mature pal-miR-628-5p

• Accession: MIMAT0040242
• Description: Pteropus alecto pal-miR-628-5p mature miRNA
• Sequence: 1 - AUGCUGACAUAUUUACUAGAGG - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-628-3p

• Accession: MIMAT0040243
• Description: Pteropus alecto pal-miR-628-3p mature miRNA
• Sequence: 39 - UCUAGUAAGAGUGGCAGUUGAA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682