Stem-loop pal-mir-9998

Accession

MI0032570

Description

Pteropus alecto pal-mir-9998 precursor miRNA

Sequence

ACACAGGAUGGUAGGCAGAUAGCugaccucccacccaggGCCCUGCCUCCUACCUGUGCUA
.((((((..((.((((((....(((..........)))....))))))))..))))))...

Structure

--A      AU  U      AUAG   accu 
   CACAGG  GG AGGCAG    Cug    c
   ||||||  || ||||||    |||     
   GUGUCC  CC UCCGUC    gac    c
AUC      AU  -      CCGg   ccac 

Annotation confidence Not enough data

Genome context

KB030584.1: 72759-72819 [+]

Mature pal-miR-9998-5p

• Accession: MIMAT0040244
• Description: Pteropus alecto pal-miR-9998-5p mature miRNA
• Sequence: 1 - ACACAGGAUGGUAGGCAGAUAGC - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-9998-3p

• Accession: MIMAT0040245
• Description: Pteropus alecto pal-miR-9998-3p mature miRNA
• Sequence: 40 - GCCCUGCCUCCUACCUGUGCUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682