Stem-loop pal-mir-8908c

Accession

MI0032572

Description

Pteropus alecto pal-mir-8908c precursor miRNA

Sequence

UACUUAGAAAGGUGCAGAUUGCUuaaacuaaguguAAUUUGUGCCUUUCUGAGU
.(((((((((((((((((((((...........)))))))))))))))))))))

Structure

U                     Uuaa 
 ACUUAGAAAGGUGCAGAUUGC    a
 |||||||||||||||||||||    c
 UGAGUCUUUCCGUGUUUAAug    u
-                     ugaa 

Annotation confidence Not enough data

Genome context

KB031124.1: 8454-8507 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pal-mir-8908c

Mature pal-miR-8908c-5p

• Accession: MIMAT0040247
• Description: Pteropus alecto pal-miR-8908c-5p mature miRNA
• Sequence: 1 - UACUUAGAAAGGUGCAGAUUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-8908c-3p

• Accession: MIMAT0040248
• Description: Pteropus alecto pal-miR-8908c-3p mature miRNA
• Sequence: 36 - AAUUUGUGCCUUUCUGAGU - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682