Stem-loop pal-mir-4646

Accession

MI0032576

Description

Pteropus alecto pal-mir-4646 precursor miRNA

Sequence

ACUGGGAAGAGGAGCUGAGGUGCugugaagaaagcUCCUCACGUCUUCUCUCCCUUCC
...((((((((((..(((((.(((........))).)))))..)))))).))))....

Structure

-ACU    -      GC     U   gug 
    GGGA AGAGGA  UGAGG GCu   a
    |||| ||||||  ||||| |||    
    CCCU UCUUCU  ACUCC cga   a
CCUU    C      GC     U   aag 

Annotation confidence Not enough data

Genome context

KB030277.1: 535328-535385 [+]

Mature pal-miR-4646-5p

• Accession: MIMAT0040255
• Description: Pteropus alecto pal-miR-4646-5p mature miRNA
• Sequence: 1 - ACUGGGAAGAGGAGCUGAGGUGC - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-4646-3p

• Accession: MIMAT0040256
• Description: Pteropus alecto pal-miR-4646-3p mature miRNA
• Sequence: 36 - UCCUCACGUCUUCUCUCCCUUCC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682