Stem-loop pal-mir-3120

Accession

MI0032577

Description

Pteropus alecto pal-mir-3120 precursor miRNA

Sequence

GCCUGUCUGUGCCUGCUGUACAggugagcggauguucugCACAGCAAGUGUAGACAGGCAG
((((((((((((.((((((.((((...........)))).)))))).))))))))))))..

Structure

--            C      A    ugag 
  GCCUGUCUGUGC UGCUGU CAgg    c
  |||||||||||| |||||| ||||    g
  CGGACAGAUGUG ACGACA gucu    g
GA            A      C    ugua 

Annotation confidence Not enough data

Genome context

KB030474.1: 15172900-15172960 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pal-mir-3120

Mature pal-miR-3120-5p

• Accession: MIMAT0040257
• Description: Pteropus alecto pal-miR-3120-5p mature miRNA
• Sequence: 1 - GCCUGUCUGUGCCUGCUGUACA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-3120-3p

• Accession: MIMAT0040258
• Description: Pteropus alecto pal-miR-3120-3p mature miRNA
• Sequence: 40 - CACAGCAAGUGUAGACAGGCAG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682