Stem-loop pal-mir-9999

Accession

MI0032579

Description

Pteropus alecto pal-mir-9999 precursor miRNA

Sequence

UGGAAACAGUGGGGCCUCUUUUgugggggaaaaugaauuaaAAGAGACCAACUGUUUCCUCG
.(((((((((.((..((((((((...............)))))))).)).)))))))))...

Structure

--U         G  GC        uggggg 
   GGAAACAGU GG  CUCUUUUg      a
   ||||||||| ||  ||||||||      a
   CCUUUGUCA CC  GAGAAaau      a
GCU         A  -A        uaagua 

Annotation confidence Not enough data

Genome context

KB031041.1: 21924589-21924650 [+]

Mature pal-miR-9999-5p

• Accession: MIMAT0040261
• Description: Pteropus alecto pal-miR-9999-5p mature miRNA
• Sequence: 1 - UGGAAACAGUGGGGCCUCUUUU - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-9999-3p

• Accession: MIMAT0040262
• Description: Pteropus alecto pal-miR-9999-3p mature miRNA
• Sequence: 42 - AAGAGACCAACUGUUUCCUCG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682