Stem-loop pal-mir-10000

Accession

MI0032581

Description

Pteropus alecto pal-mir-10000 precursor miRNA

Sequence

ACAUCAAGACUAGGCAUACACUGcucaucacuccagcaGUGUAUGCUAGUCUUGACAUCU
...((((((((((.(((((((((((.........))))))))))))))))))))).....

Structure

--ACA          G           cau 
     UCAAGACUAG CAUACACUGcu   c
     |||||||||| |||||||||||   a
     AGUUCUGAUC GUAUGUGacga   c
UCUAC          -           ccu 

Annotation confidence Not enough data

Genome context

KB030474.1: 8105416-8105475 [-]

Mature pal-miR-10000-5p

• Accession: MIMAT0040265
• Description: Pteropus alecto pal-miR-10000-5p mature miRNA
• Sequence: 1 - ACAUCAAGACUAGGCAUACACUG - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-10000-3p

• Accession: MIMAT0040266
• Description: Pteropus alecto pal-miR-10000-3p mature miRNA
• Sequence: 39 - GUGUAUGCUAGUCUUGACAUCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682