Stem-loop pal-mir-1379

Accession

MI0032582

Description

Pteropus alecto pal-mir-1379 precursor miRNA

Sequence

CUCAGGCUCUCAGCCCGAGCCguguucuucagacgggCACGGGCUGCAGCGCCGACGC
....(((.(((((((((.(((.((((.....))))))).))))))).)).))).....

Structure

-CUCA   U  -       A   g    c 
     GGC CU CAGCCCG GCC uguu u
     ||| || ||||||| ||| |||| u
     CCG GA GUCGGGC Cgg gcag c
CGCAG   C  C       A   -    a 

Annotation confidence Not enough data

Genome context

KB030861.1: 7838332-7838389 [-]

Mature pal-miR-1379-5p

• Accession: MIMAT0040267
• Description: Pteropus alecto pal-miR-1379-5p mature miRNA
• Sequence: 1 - CUCAGGCUCUCAGCCCGAGCC - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-1379-3p

• Accession: MIMAT0040268
• Description: Pteropus alecto pal-miR-1379-3p mature miRNA
• Sequence: 38 - CACGGGCUGCAGCGCCGACGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682