Stem-loop pal-mir-282

Accession

MI0032590

Description

Pteropus alecto pal-mir-282 precursor miRNA

Sequence

AGAGGUGUAGGGCAUGGGAAaagggggcgacgagguucgccucccgCCGCACCCGCAUCCUCGGG
.(((((((.(((..(((.....((((((((......))))))))..)))..)))))).))))...

Structure

--A    -   A   CA   GAAaa        cg 
   GAGG UGU GGG  UGG     gggggcga  a
   |||| ||| |||  |||     ||||||||   
   CUCC ACG CCC  GCC     ccuccgcu  g
GGG    U   -   AC   ---gc        ug 

Annotation confidence Not enough data

Genome context

KB030668.1: 213415-213479 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-282

Mature pal-miR-282-5p

• Accession: MIMAT0040282
• Description: Pteropus alecto pal-miR-282-5p mature miRNA
• Sequence: 1 - AGAGGUGUAGGGCAUGGGAA - 20
• Evidence: experimental ; Illumina [1]

Mature pal-miR-282-3p

• Accession: MIMAT0040283
• Description: Pteropus alecto pal-miR-282-3p mature miRNA
• Sequence: 47 - CCGCACCCGCAUCCUCGGG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682