Stem-loop pal-mir-339a

Accession

MI0032591

Description

Pteropus alecto pal-mir-339a precursor miRNA

Sequence

UCCCUGUCCUCCAGGAGCUCAcuugugucugccgugAGCUCCUCGGGGCCAGAGCCC
...(((.((((.((((((((((..((....)).)))))))))).)))).))).....

Structure

--UCC   U    C          uu  g 
     CUG CCUC AGGAGCUCAc  gu u
     ||| |||| ||||||||||  ||  
     GAC GGGG UCCUCGAgug  cg c
CCCGA   C    C          -c  u 

Annotation confidence Not enough data

Genome context

KB030838.1: 728039-728095 [-]

Mature pal-miR-339a-5p

• Accession: MIMAT0040284
• Description: Pteropus alecto pal-miR-339a-5p mature miRNA
• Sequence: 1 - UCCCUGUCCUCCAGGAGCUCA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-339a-3p

• Accession: MIMAT0040285
• Description: Pteropus alecto pal-miR-339a-3p mature miRNA
• Sequence: 37 - AGCUCCUCGGGGCCAGAGCCC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682