Stem-loop pal-mir-421

Accession

MI0032593

Description

Pteropus alecto pal-mir-421 precursor miRNA

Sequence

CUCAUUAAAUGUUUGUUGAAUGAaaaaaugaaucAUCAACAGACAUUAAUUGGGCG
((((...((((((((((((.(((.........)))))))))))))))...))))..

Structure

--    UUA            A   aaa 
  CUCA   AAUGUUUGUUGA UGA   a
  ||||   |||||||||||| |||   a
  GGGU   UUACAGACAACU Acu   u
GC    UAA            -   aag 

Annotation confidence Not enough data

Genome context

KB030901.1: 199420-199475 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-421

Mature pal-miR-421-5p

• Accession: MIMAT0040288
• Description: Pteropus alecto pal-miR-421-5p mature miRNA
• Sequence: 1 - CUCAUUAAAUGUUUGUUGAAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-421-3p

• Accession: MIMAT0040289
• Description: Pteropus alecto pal-miR-421-3p mature miRNA
• Sequence: 35 - AUCAACAGACAUUAAUUGGGCG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682