Stem-loop pal-mir-10004

Accession

MI0032594

Description

Pteropus alecto pal-mir-10004 precursor miRNA

Sequence

CACCGGGCUGGCGGAGUAGGCAcuucggcccuugugCCCGCUCUGCCAGCCUGGUGAG
(((((((((((((((((.(((((..........))))).)))))))))))))))))..

Structure

--                 A     uucg 
  CACCGGGCUGGCGGAGU GGCAc    g
  ||||||||||||||||| |||||     
  GUGGUCCGACCGUCUCG CCgug    c
GA                 C     uucc 

Annotation confidence Not enough data

Genome context

KB030717.1: 4588495-4588552 [+]

Mature pal-miR-10004-5p

• Accession: MIMAT0040290
• Description: Pteropus alecto pal-miR-10004-5p mature miRNA
• Sequence: 1 - CACCGGGCUGGCGGAGUAGGCA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-10004-3p

• Accession: MIMAT0040291
• Description: Pteropus alecto pal-miR-10004-3p mature miRNA
• Sequence: 37 - CCCGCUCUGCCAGCCUGGUGAG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682