Stem-loop pal-mir-10005

Accession

MI0032595

Description

Pteropus alecto pal-mir-10005 precursor miRNA

Sequence

UCACCAUGUCGCAGGACCGUGUCGCcaucucggguaaccagaagucccguauuggccacUAUGAGCUCCUGGACACCAUUGGCA
...(((((((.(((((((((((.((((...((((...........))))...)))).)).))).).)))))))))....)))..

Structure

UCA   ----    G     - -   -  C    ucu    uaac 
   CCA    UGUC CAGGA C CGU GU GCca   cggg    c
   |||    |||| ||||| | ||| || ||||   ||||    a
   GGU    ACAG GUCCU G GUA ca cggu   gccc    g
-AC   UACC    -     C A   U  c    uau    ugaa 

Annotation confidence Not enough data

Genome context

KB031134.1: 14770954-14771037 [+]

Mature pal-miR-10005-5p

• Accession: MIMAT0040292
• Description: Pteropus alecto pal-miR-10005-5p mature miRNA
• Sequence: 1 - UCACCAUGUCGCAGGACCGUGUCGC - 25
• Evidence: experimental ; Illumina [1]

Mature pal-miR-10005-3p

• Accession: MIMAT0040293
• Description: Pteropus alecto pal-miR-10005-3p mature miRNA
• Sequence: 60 - UAUGAGCUCCUGGACACCAUUGGCA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682