Stem-loop pal-mir-9287

Accession

MI0032596

Description

Pteropus alecto pal-mir-9287 precursor miRNA

Sequence

UGGGGGAGAGAACAGGUAGACAgcauccucagcguccccagagaagcugACACCUAUUCUCUCCCCAGUGAU
..((((((((((.((((.(.((((.((.((..........)))).)))).))))).))))))))))......

Structure

----UG          C    A A    a  c  agcg 
      GGGGAGAGAA AGGU G CAgc uc uc    u
      |||||||||| |||| | |||| || ||     
      CCCCUCUCUU UCCA C gucg ag ag    c
UAGUGA          A    - A    a  -  accc 

Annotation confidence Not enough data

Genome context

KB030893.1: 1329989-1330060 [+]

Mature pal-miR-9287-5p

• Accession: MIMAT0040294
• Description: Pteropus alecto pal-miR-9287-5p mature miRNA
• Sequence: 1 - UGGGGGAGAGAACAGGUAGACA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-9287-3p

• Accession: MIMAT0040295
• Description: Pteropus alecto pal-miR-9287-3p mature miRNA
• Sequence: 50 - ACACCUAUUCUCUCCCCAGUGAU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682