Stem-loop pal-mir-182

Accession

MI0032601

Description

Pteropus alecto pal-mir-182 precursor miRNA

Sequence

UUUGGCAAUGGUAGAACUCGCACUggugagguaaugggaccggUGGUUCUAGACUUGCCAACUA
.(((((((...((((((...(((((((...........)))))))))))))...)))))))...

Structure

--U       UGG      UCG       gagg 
   UUGGCAA   UAGAAC   CACUggu    u
   |||||||   ||||||   |||||||    a
   AACCGUU   AUCUUG   GUggcca    a
AUC       CAG      ---       gggu 

Annotation confidence Not enough data

Genome context

KB030581.1: 9534790-9534853 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pal-mir-182

Mature pal-miR-182-5p

• Accession: MIMAT0040302
• Description: Pteropus alecto pal-miR-182-5p mature miRNA
• Sequence: 1 - UUUGGCAAUGGUAGAACUCGCACU - 24
• Evidence: experimental ; Illumina [1]

Mature pal-miR-182-3p

• Accession: MIMAT0040303
• Description: Pteropus alecto pal-miR-182-3p mature miRNA
• Sequence: 44 - UGGUUCUAGACUUGCCAACUA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682