Stem-loop pal-mir-8908d

Accession

MI0032605

Description

Pteropus alecto pal-mir-8908d precursor miRNA

Sequence

CACUUAGAAAGGUUCAGAUCACuuagacuauguguAAUUUGGGCCUUUCUGAGUAGA
.(((((((((((((((((((((.........)))..))))))))))))))))))...

Structure

--C                  --   uua 
   ACUUAGAAAGGUUCAGAU  CAC   g
   ||||||||||||||||||  |||   a
   UGAGUCUUUCCGGGUUUA  gug   c
AGA                  Au   uau 

Annotation confidence Not enough data

Genome context

KB031124.1: 13006-13062 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pal-mir-8908d

Mature pal-miR-8908d-5p

• Accession: MIMAT0040310
• Description: Pteropus alecto pal-miR-8908d-5p mature miRNA
• Sequence: 1 - CACUUAGAAAGGUUCAGAUCAC - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-8908d-3p

• Accession: MIMAT0040311
• Description: Pteropus alecto pal-miR-8908d-3p mature miRNA
• Sequence: 36 - AAUUUGGGCCUUUCUGAGUAGA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682