Stem-loop pal-mir-10009

Accession

MI0032606

Description

Pteropus alecto pal-mir-10009 precursor miRNA

Sequence

CCUGGGAAUUGUAGUCGAGGCgggggggcuucacggcggCUGGACUACAACUCCCAGCAG
.((((((.((((((((.((.((..(........)..)).)).)))))))).))))))...

Structure

--C      A        G  G  gg ggg 
   CUGGGA UUGUAGUC AG Cg  g   c
   |||||| |||||||| || ||  |    
   GACCCU AACAUCAG UC gc  c   u
GAC      C        G  g  gg acu 

Annotation confidence Not enough data

Genome context

KB030715.1: 6757027-6757086 [+]

Mature pal-miR-10009-5p

• Accession: MIMAT0040312
• Description: Pteropus alecto pal-miR-10009-5p mature miRNA
• Sequence: 1 - CCUGGGAAUUGUAGUCGAGGC - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-10009-3p

• Accession: MIMAT0040313
• Description: Pteropus alecto pal-miR-10009-3p mature miRNA
• Sequence: 40 - CUGGACUACAACUCCCAGCAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682