Stem-loop pal-mir-219b

Accession

MI0032607

Description

Pteropus alecto pal-mir-219b precursor miRNA

Sequence

UCCAGCCACAAUUCUCGGUUGgccgcagacucgUACAAGAAUUGCGUUUGGACA
(((((.(.((((((((((((.......))).))....))))))).).)))))..

Structure

--     C A       ----  -   Gg 
  UCCAG C CAAUUCU    CG GUU  c
  ||||| | |||||||    || |||  c
  AGGUU G GUUAAGA    gc cag  g
AC     U C       ACAU  u   ac 

Annotation confidence Not enough data

Genome context

KB030979.1: 4227884-4227937 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-219b

Mature pal-miR-219b-5p

• Accession: MIMAT0040314
• Description: Pteropus alecto pal-miR-219b-5p mature miRNA
• Sequence: 1 - UCCAGCCACAAUUCUCGGUUG - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-219b-3p

• Accession: MIMAT0040315
• Description: Pteropus alecto pal-miR-219b-3p mature miRNA
• Sequence: 34 - UACAAGAAUUGCGUUUGGACA - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682