Stem-loop pal-mir-1307

Accession

MI0032608

Description

Pteropus alecto pal-mir-1307 precursor miRNA

Sequence

UCGACCGGACCUCGACCGGCUcgucuguguugccaaucgACUCGGCGUGGCGUCGGUCGU
.(((((((.((.((.((((.(((..((......))..))).)))))).))..))))))).

Structure

U       -A  U  A    C   uc  ug 
 CGACCGG  CC CG CCGG Ucg  ug  u
 |||||||  || || |||| |||  ||   
 GCUGGCU  GG GC GGCU Agc  ac  u
U       GC  U  -    C   ua  cg 

Annotation confidence Not enough data

Genome context

KB031059.1: 12012512-12012571 [+]

Mature pal-miR-1307-5p

• Accession: MIMAT0040316
• Description: Pteropus alecto pal-miR-1307-5p mature miRNA
• Sequence: 1 - UCGACCGGACCUCGACCGGCU - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-1307-3p

• Accession: MIMAT0040317
• Description: Pteropus alecto pal-miR-1307-3p mature miRNA
• Sequence: 40 - ACUCGGCGUGGCGUCGGUCGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682