Stem-loop pal-mir-10010

Accession

MI0032609

Description

Pteropus alecto pal-mir-10010 precursor miRNA

Sequence

UCCCCUCGCGGGUGACGCUUAgccguagcggacucAGCCUUGUGACUGACGAUCGGACA
(((..(((..(((.(((((.(((((...))).)).)))...)).)))..)))..)))..

Structure

--   CC   CG   G  ---   U  -   u 
  UCC  UCG  GGU AC   GCU Ag ccg  
  |||  |||  ||| ||   ||| || ||| a
  AGG  AGC  UCA UG   CGA uc ggc  
AC   CU   AG   G  UUC   c  a   g 

Annotation confidence Not enough data

Genome context

KB030575.1: 3046033-3046091 [+]

Mature pal-miR-10010-5p

• Accession: MIMAT0040318
• Description: Pteropus alecto pal-miR-10010-5p mature miRNA
• Sequence: 1 - UCCCCUCGCGGGUGACGCUUA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-10010-3p

• Accession: MIMAT0040319
• Description: Pteropus alecto pal-miR-10010-3p mature miRNA
• Sequence: 36 - AGCCUUGUGACUGACGAUCGGACA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682