Stem-loop pal-mir-346

Accession

MI0032621

Description

Pteropus alecto pal-mir-346 precursor miRNA

Sequence

UGUCUGCCCGCAUGCCUGCCUCUuuguugcucugaaggAGGCAGGGGCUGGGCCUGCAGC
(((..((((((...(((((((((((.........))))))))))).)).))))..)))..

Structure

--   CU    -  AUG           guu 
  UGU  GCCC GC   CCUGCCUCUuu   g
  |||  |||| ||   |||||||||||   c
  ACG  CGGG CG   GGACGGAggaa   u
CG   UC    U  --G           guc 

Annotation confidence Not enough data

Genome context

KB030800.1: 1005690-1005749 [+]

Mature pal-miR-346-5p

• Accession: MIMAT0040341
• Description: Pteropus alecto pal-miR-346-5p mature miRNA
• Sequence: 1 - UGUCUGCCCGCAUGCCUGCCUCU - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-346-3p

• Accession: MIMAT0040342
• Description: Pteropus alecto pal-miR-346-3p mature miRNA
• Sequence: 39 - AGGCAGGGGCUGGGCCUGCAGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682