Stem-loop pal-mir-1296

Accession

MI0032624

Description

Pteropus alecto pal-mir-1296 precursor miRNA

Sequence

UAGGGCCCUGGCUCCAUCUCcuuuaggaaaaccuucuguggggAGUGGGGCUUCGACCCUAAC
(((((....(((((((.((((((..((((....))))..)))))))))))))....)))))..

Structure

--     CCCU       U      ua    a 
  UAGGG    GGCUCCA CUCcuu  ggaa a
  |||||    ||||||| ||||||  ||||  
  AUCCC    UCGGGGU GAgggg  ucuu c
CA     AGCU       -      ug    c 

Annotation confidence Not enough data

Genome context

KB030800.1: 18636683-18636745 [+]

Mature pal-miR-1296-5p

• Accession: MIMAT0040347
• Description: Pteropus alecto pal-miR-1296-5p mature miRNA
• Sequence: 1 - UAGGGCCCUGGCUCCAUCUC - 20
• Evidence: experimental ; Illumina [1]

Mature pal-miR-1296-3p

• Accession: MIMAT0040348
• Description: Pteropus alecto pal-miR-1296-3p mature miRNA
• Sequence: 44 - AGUGGGGCUUCGACCCUAAC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682